raised spots on my penis. Need advice

Long post ahead. Just wanna give as much detail as possible :

Had protected oral and vaginal intercourse about 6 weeks ago. 4 Weeks after exposure I started getting a slight burning sensation and a feeling of pee being stuck in my urethra, which later turned into what felt like swelling in scrotum. Went to get tested and everything came back negative. Went to Urologist and got more extensive pee test and came back negative.

A week later (5 weeks post exposure) I started noticing these 3 raised lumps on my shaft.

The lumps in picture 1 are barely noticeable. Only the bigger one (that can be seen in picture 2) is noticeable by the naked eye. One of the lumps seems to have either gotten bigger or whiter since then and is a little noticeable now. They basically just look like my shaft skin inflated. I also had what looked like a skin tag on my scrotum and another lump on the bottom of my shaft with a black dot in it. I went to a Dermatologist to check it out. I have since seen another one of these tags elsewhere under my shaft (picture with yellow circle).

I have since:

Went to the derm and got 3 biopsies to see what these were.

1. The lump with a black dot. Dr. was sure it's a cyst but I wanted to check anyways
2. Skin tag on scrotum. He was also pretty sure but wanted to test anyways.
3. The bigger lump of the 3 on the shaft. - Doc wasn't sure on this. He went 60/40 some form of skin tag vs warts

I should be expecting the results any day now.

I also have what I believe is a cut on my Urethra, which I am now thinking might be the cause of a lot of my initial symptoms. I didn't show this to the derm bc I didn't notice it at the time, but I'd like some opinions on this

I was sure these were warts, based on the timing of the intercourse, but they are really really small and seem too smooth (no cauliflower look on top).

I also spoke to a sex std expert online who said he highly doubts these would be warts (he didn't see the pictures) BC :

1. A one time exposure to HPV is unlikely to result contracting HPV
2. Warts typically show up 2 months later. These warts would be unusually soon
3. The warts are on a part of my penis that would have been covered by the condom

So, what do we think? Warts or something else?

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