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Gastroenteritis in children

Medical Professionals

Professional Reference articles are designed for health professionals to use. They are written by UK doctors and based on research evidence, UK and European Guidelines. You may find the Gastroenteritis in children article more useful, or one of our other health articles.

Infective gastroenteritis in young children is characterised by the sudden onset of diarrhoea, with or without vomiting. Most cases are due to a viral infection but some are caused by bacterial or protozoal infections. The illness usually resolves without treatment within days but severe diarrhoea can rapidly cause dehydration, which may be life-threatening1 .

See also the separate articles Gastroenteritis in Adults and Older Children, Traveller's Diarrhoea and Childhood Diarrhoea.

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  • Gastroenteritis is very common, with many children having more than one episode a year. Many children are treated by parents or other carers without seeking professional advice but approximately 10% of children younger than 5 years of age present with gastroenteritis to healthcare services each year. In a UK study, diarrhoeal illness accounted for 16% of medical presentations to a major paediatric emergency department1 .

  • Worldwide, 2 billion cases of acute gastroenteritis and 1.9 million deaths occur each year in children aged under 5 years2 .

  • Gastroenteritis is caused by a variety of viral, bacterial and parasitic pathogens. A longitudinal study of intestinal infectious illness in 2009 presenting to UK GPs showed that norovirus was the most common organism among cases presenting to the GP (two consultations per 1,000 person-years. Rotavirus and sapovirus were also common (∼1.5 consultations per 1,000 person-years). One in seven patients with campylobacteriosis consulted their GP, resulting in approximately one consultation per 1,000 person-years based on culture diagnostics. Other organisms occurred at rates of less than one consultation per 1,000 person-years. Salmonellosis was uncommon (<0.2 consultations per 1,000 person-years), although one in three patients consulted their GP in England,

  • Another infective cause of diarrhoea is the Ebola virus. The 2014 outbreak is one of the largest in history and the first in West Africa. Ebola should be considered in any child or young person who has developed diarrhoea, vomiting and weakness and who has arrived from countries where it is endemic or spent time in these countries within the previous 21 days. At the time of writing there are no current outbreaks but significant outbreaks in Guinea and the Democratic Republic of Congo occurred in February 2021. The latest information about outbreaks can be found on the GOV.UK website3 .

  • The causative agent for most cases of gastroenteritis is never isolated and the responsible agent never diagnosed.

Risk factors

  • Poor hygiene and lack of sanitation increase the incidence - eg, bad water in the developing world.

  • Compromised immune system.

  • Infection may arise from poorly cooked food, from cooked food that has been left too long at room temperature or from uncooked food. Insufficient reheating of food not only fails to kill bacteria but may speed up multiplication and increase the bacterial load ingested. Even if reheating of cooked food kills bacteria, enterotoxins such as staphylococcal exotoxin are not destroyed.


  • Gastroenteritis should be suspected if there is a sudden change in stool consistency to loose or watery stools and/or a sudden onset of vomiting.

  • If gastroenteritis is suspected then ask about recent contact with someone with acute diarrhoea and/or vomiting, exposure to a possible or known source of bowel infection (eg, contaminated water or food) and any recent travel abroad.

  • Children are often febrile with any type of infective gastroenteritis.

  • Antibiotics may cause Clostridiodes difficile colitis.

  • Bloody diarrhoea is usually caused by either Campylobacter spp. (mainly Campylobacter jejuni), where bloody diarrhoea may be present in up to 29% of cases, and Escherichia coli O157 infections, where bloody diarrhoea may be present in over 70% of cases4 . However, the possibility of Ebola should be borne in mind due to spread outside Africa. The Department of Health's advice is that the risk of contracting Ebola in the UK is currently low3 . Ebola virus typically causes fever (greater than 38.6°C), severe headache, muscle pain, weakness, diarrhoea, vomiting, abdominal pain, lack of appetite, and unexplained bleeding or bruising.

  • Always consider other possible diagnoses (eg, other causes of fever) and always reassess the diagnosis if vomiting or diarrhoea becomes prolonged. See also the separate article Ill and Feverish Child

  • Most children do not become significantly dehydrated but always assess for the presence and degree of dehydration. See also the separate article Dehydration in Children.

  • Always perform an abdominal examination (including any areas of tenderness, any masses, distension and bowel sounds). Record findings, even if negative. Always repeat a thorough examination if the situation changes or doesn't settle as expected.

Red flags

  • Appears to be unwell or deteriorating.

  • Altered responsiveness (eg, irritable, lethargic).

  • Sunken eyes.

  • Tachycardia.

  • Tachypnoea.

  • Reduced skin turgor.


Arrange emergency transfer to secondary care

  • Decreased level of consciousness.

  • Pale or mottled skin.

  • Cold extremities.

  • Decreased level of consciousness.

  • Tachycardia.

  • Tachypnoea.

  • Weak peripheral pulses.

  • Prolonged capillary refill time.

  • Hypotension.

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Differential diagnosis

Not all diarrhoea or vomiting is gastroenteritis, especially in children, and other causes must be considered, including the following:


  • Stool samples - for microscopy (include ova, cysts and parasites), culture and sensitivity. Usually samples are not required but should be sent for microbiological investigation in outbreaks - eg, in schools, or if:

    • Septicaemia is suspected.

    • There is blood and/or mucus in the stool.

    • The child is immunocompromised.

    • The child has recently been abroad.

    • The diarrhoea has not improved by day seven.

    • There is uncertainty about the diagnosis of gastroenteritis.

  • Blood tests - FBC, renal function and electrolytes for patients in the hospital setting.

  • Perform a blood culture if giving antibiotic therapy.

  • Children with E. coli O157 infection require specialist advice on monitoring for haemolytic uraemic syndrome.

  • Other tests will depend on the individual case and the need to rule out other possible diagnoses.

Both dysentery and food poisoning are notifiable diseases. The laboratory may report the isolation to the relevant authority but it is better to duplicate notification than to overlook it. Notification is a statutory duty.

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During remote (eg, telephone) assessment:

  • Arrange emergency transfer to secondary care for children with symptoms suggesting shock.

  • Arrange face-to-face assessment for children:

    • With symptoms suggesting an alternative serious diagnosis.

    • At high risk of dehydration.

    • With symptoms suggesting clinical dehydration.

    • Whose social circumstances make remote assessment unreliable.

  • Consider repeat face-to-face assessment or referral to secondary care for children:

    • With symptoms and/or signs suggesting an alternative serious diagnosis.

    • With red flag symptoms and/or signs.

    • Whose social circumstances require continued involvement of healthcare professionals.

  • Provide a safety net for children who will be managed at home, including:

    • Information for parents and carers on how to recognise developing red flag symptoms.

    • Information on how to get immediate help from an appropriate healthcare professional if red flag symptoms develop.

    • Arrangements for follow-up at a specified time and place, if necessary.

Fluid management

In children with gastroenteritis but without clinical dehydration:

  • Continue breastfeeding and other milk feeds.

  • Encourage fluid intake.

  • Discourage the drinking of carbonated drinks, especially in those at increased risk of dehydration. Fruit juices should also be avoided in severe dehydration, but the use of dilute apple juice as an alternative to electrolyte solution in the initial management of mildly dehydrated children has gained some support5 .

  • Offer oral rehydration salt (ORS) solution as supplemental fluid to those at increased risk of dehydration.

In children with clinical dehydration, including hypernatraemic dehydration:

  • Use low-osmolarity ORS solution (240-250 mOsm/L).

  • Give 50 ml/kg for fluid deficit replacement over four hours as well as maintenance fluid for oral rehydration therapy.

  • Give the ORS solution frequently and in small amounts.

Racecadotril is an intestinal antisecretory enkephalinase inhibitor that inhibits the breakdown of endogenous enkephalins. It reduces the hypersecretion of water and electrolytes into the intestine. It is licensed for the complementary symptomatic treatment of acute diarrhoea in infants aged over 3 months, together with oral rehydration and the usual support measures (dietary advice and increased daily fluid intake), when these measures alone are insufficient to control the clinical condition.

Consider supplementation with their usual fluids (including milk feeds or water but not fruit juices or carbonated drinks) if they refuse to take sufficient quantities of ORS solution and do not have red flag symptoms or signs.

Consider giving the ORS solution via a nasogastric tube if they are unable to drink it or if they vomit persistently.

Monitor the response to oral rehydration therapy by regular clinical assessment.

Fluid management

Use intravenous fluid therapy for clinical dehydration if:

  • Shock is suspected or confirmed.

  • A child with red flag symptoms or signs (see 'Red flags' box, above) shows clinical evidence of deterioration despite oral rehydration therapy.

  • A child persistently vomits the ORS solution, given orally or via a nasogastric tube.

If intravenous fluid therapy is required for rehydration (and the child is not hypernatraemic at presentation):

  • Use an isotonic solution, such as 0.9% sodium chloride, or 0.9% sodium chloride with 5% glucose, for both fluid deficit replacement and maintenance.

  • For those who required initial rapid intravenous fluid boluses for suspected or confirmed shock, add 100 ml/kg for fluid deficit replacement to maintenance fluid requirements and monitor the clinical response.

  • For those who were not shocked at presentation, add 50 ml/kg for fluid deficit replacement to maintenance fluid requirements and monitor the clinical response.

  • Measure plasma sodium, potassium, urea, creatinine and glucose at the outset, monitor regularly and alter the fluid composition or rate of administration if necessary.

  • Consider providing intravenous potassium supplementation once the plasma potassium level is known.

Nutritional management

During rehydration therapy:

  • Continue breastfeeding.

  • Do not give solid foods.

  • In children without red flag symptoms or signs, do not routinely give oral fluids other than ORS solution; however, consider supplementation with the child's usual fluids (including milk feeds or water but not fruit juices or carbonated drinks) if they consistently refuse ORS solution.

  • In children with red flag symptoms or signs, do not give oral fluids other than ORS solution.

After rehydration:

  • Give full-strength milk straightaway.

  • Re-introduce the child's usual solid food.

  • Avoid giving fruit juices and carbonated drinks until the diarrhoea has stopped.


  • Antibiotic therapy should not be used routinely but should be given:

    • For suspected or confirmed septicaemia.

    • With extra-intestinal spread of bacterial infection.

    • When younger than 6 months with salmonella gastroenteritis.

    • In those who are malnourished or immunocompromised with salmonella gastroenteritis.

    • Where there is C. difficile-associated pseudomembranous enterocolitis, giardiasis, bacillary dysentery, amoebiasis or cholera.

    • For children who have recently been abroad, seek advice from the local health protection team about antibiotic therapy.

  • Advice from the local health protection team should also be sought regarding the need for antibiotic treatment or stool testing for microbiological clearance, particularly in a child:

    • Younger than 6 months of age with salmonella infection, or who is malnourished or immunocompromised with salmonella infection.

    • With Shiga toxin-producing E. coli (STEC) infection.

  • Antiemetics, zinc supplements, and probiotics are not recommended in primary care6 .

Information and advice for parents and carers

Advise parents, carers and children that:

  • Washing hands with soap (liquid if possible) in warm running water and careful drying are the most important factors in preventing the spread of gastroenteritis.

  • Hand washing immediately after going to the toilet or changing nappies (parents/carers) and before preparing, serving or eating food is vital.

  • Towels used by infected children should not be shared.

  • Children should not attend any school or other childcare facility while they have diarrhoea or vomiting caused by gastroenteritis.

  • Children should not go back to their school or other childcare facility until at least 48 hours after the last episode of diarrhoea or vomiting.

  • Children should not swim in swimming pools for two weeks after the last episode of diarrhoea.


  • There is an increased risk of dehydration in1 :

    • Children younger than 1 year, particularly those younger than 6 months.

    • Infants who were of low birth weight.

    • Children who have passed more than five diarrhoeal stools in the previous 24 hours.

    • Children who have vomited more than twice in the previous 24 hours.

    • Children who have not been offered or have not been able to tolerate supplementary fluids before presentation.

    • Infants who have stopped breastfeeding during the illness.

    • Children with signs of malnutrition.

  • Haemolytic uraemic syndrome is a serious complication.

  • Loss of lactase from the gut (causing lactose intolerance) may occur, especially after viral infection. This is quite common but usually not a problem. See also the separate article Lactose Intolerance.


  • Usually there is uneventful recovery. Diarrhoea usually lasts for 5-7 days and in most it stops within two weeks. Vomiting usually lasts for 1-2 days and in most it stops within three days.

  • The number of deaths from rotavirus in children in England and Wales is probably no more than three or four a year, although it will be much greater in less developed countries. Worldwide the number was 128,500 in 20167 . Rotavirus surveillance statistics demonstrate a steady decrease in incidence in the UK since the introduction a rotavirus vaccine8 .

  • Infants and those with immunological compromise are more likely to have more severe disease and to require admission to hospital for rehydration. In severe cases, hypovolaemic shock and even death can occur.


  • Breastfeeding confers some protection against gastroenteritis. One study found that exclusive breastfeeding, compared with not breastfeeding, protects against hospitalisation for diarrhoea and lower respiratory tract infection; this is especially important in developing countries9 .

  • There is now an effective rotavirus vaccine available7 . Routine immunisation against rotavirus has been added to the UK immunisation schedule and was available from September 2013. Rotarix® is administered orally at 2 and 3 months of age10 .

Further reading and references

  1. Diarrhoea and vomiting in children under 5; NICE Clinical Guideline (April 2009)
  2. Farthing M, Salam MA, Lindberg G, et al; Acute diarrhea in adults and children: a global perspective. J Clin Gastroenterol. 2013 Jan;47(1):12-20. doi: 10.1097/MCG.0b013e31826df662.
  3. Ebola and Marburg haemorrhagic fevers: outbreaks and case locations; GOV.UK, 2021
  4. Talan D, Moran GJ, Newdow M, et al; Etiology of bloody diarrhea among patients presenting to United States emergency departments: prevalence of Escherichia coli O157:H7 and other enteropathogens. Clin Infect Dis. 2001 Feb 15;32(4):573-80. doi: 10.1086/318718. Epub 2001 Feb 9.
  5. Freedman SB, Willan AR, Boutis K, et al; Effect of Dilute Apple Juice and Preferred Fluids vs Electrolyte Maintenance Solution on Treatment Failure Among Children With Mild Gastroenteritis: A Randomized Clinical Trial. JAMA. 2016 May 10;315(18):1966-74. doi: 10.1001/jama.2016.5352.
  6. Gastroenteritis; NICE CKS, August 2020 (UK access only)
  7. Troeger C, Khalil IA, Rao PC, et al; Rotavirus Vaccination and the Global Burden of Rotavirus Diarrhea Among Children Younger Than 5 Years. JAMA Pediatr. 2018 Oct 1;172(10):958-965. doi: 10.1001/jamapediatrics.2018.1960.
  8. National Norovirus and Rotavirus Bulletin; GOV.UK, 2021
  9. Quigley MA, Kelly YJ, Sacker A; Breastfeeding and hospitalization for diarrheal and respiratory infection in the United Kingdom Millennium Cohort Study. Pediatrics. 2007 Apr;119(4):e837-42.
  10. Rotavirus; GOV.UK.

Article history

The information on this page is written and peer reviewed by qualified clinicians.

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